用python的requests模块，匹配uniprot中的蛋白序列

用python的requests模块，匹配uniprot中的蛋白序列

import pandas as pd
import requests
file='E:/jiaqiwork/11gcd.txt'
for line in open(file,'r'):
    lines=line.strip('n')
    params={"query":line,"format":"fasta"}
    print(params)
    response = requests.get("http://www.uniprot.org/uniprot/", params=params)
    print(response.text)
    mydb=open("E:/jiaqiwork/out.fasta",'a')
    c=str(response.text)
    mydb.write(c)
    mydb.close()
    pass

代码的基础思想是用requests调用uniprot网站的API

# import requests
# params = {"query": "P00750", "format": "fasta", "include": "yes"}
# response = requests.get("http://www.uniprot.org/uniprot/", params=params)
# print (response.text)