安装问题：Linux Java和R不能一起工作

概述安装问题：Linux Java和R不能一起工作

我差不多尝试了3天，现在安装rJava并在我的linux机器上封装FSelector，但是不能这样做。 我search了所有的论坛，并尝试了一些技巧…但不幸的是找不到任何解决scheme。 首先我没有做任何修改，尝试在rkward中安装rJava，这给了我以下错误：

configure: error: One or more JNI types differ from the corresponding native type. You may need to use non-standard compiler flags or a different compiler in order to fix this. ERROR: configuration Failed for package 'rJava' * removing '/home/uwe/.rkward/library/rJava' Warnmeldung: In install.packages(pkgs = c("rJava"),lib = "/home/uwe/.rkward/library",: Installation des Pakets 'rJava' hatte Exit-Status ungleich 0

于是我开始search，发现一个小费。 我做了以下运行;

uwe@linux-k2a8:~> sudo R CMD javareconf Java interpreter : /usr/bin/java Java version : 1.7.0_45 Java home path : /usr/lib/jdk1.7.0_45/jre Java compiler : /usr/bin/javac Java headers gen.: /usr/bin/javah Java archive tool: /usr/bin/jar NOTE: Your JVM has a bogus java.library.path system property! Trying a heuristic via sun.boot.library.path to find jvm library... Java library path: $(JAVA_HOME)/lib/i386/clIEnt JNI linker flags : -L$(JAVA_HOME)/lib/i386/clIEnt -ljvm JNI cpp flags : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/linux Updating Java configuration in /usr/lib/R Done.

也做了检查

uwe@linux-k2a8:~> java -version java version "1.7.0_45" Java(TM) SE Runtime Environment (build 1.7.0_45-b18) Java HotSpot(TM) Server VM (build 24.45-b08,mixed mode) uwe@linux-k2a8:~> sudo /usr/sbin/update-alternatives --config java There are 4 choices for the alternative java (provIDing /usr/bin/java). Selection Path Priority Status ------------------------------------------------------------ 0 /usr/lib/jvm/jre-1.7.0-openjdk/bin/java 17147 auto mode 1 /usr/java/latest/bin/java 1 manual mode * 2 /usr/lib/jdk_Oracle/bin/java 3 manual mode 3 /usr/lib/jvm/jre-1.5.0-gcj/bin/java 1500 manual mode 4 /usr/lib/jvm/jre-1.7.0-openjdk/bin/java 17147 manual mode Press enter to keep the current choice[*],or type selection number:

我绝对不知道这个设置有什么问题，因为我的Java似乎有了JDK和R所需的所有其他东西。

在Ubuntu OpenJDK 7上启用密码

如何在不列出文件的情况下获得windows计算机文件计数？

如何在Java文件系统中“漫步”

在linux下运行java jar

查找进程在windows中是否存在

在这里你的信息我的系统：

uwe@linux-k2a8:~> uname -rm 3.4.63-2.44-desktop i686 uwe@linux-k2a8:~> cat /proc/version linux version 3.4.63-2.44-desktop (geeko@buildhost) (gcc version 4.7.1 20120723 [gcc-4_7-branch revision 189773] (S linux) ) #1 SMP PREEMPT Wed Oct 2 11:18:32 UTC 2013 (d91a619)

我会非常感谢任何build议，让rJava（和FSelector）很快运行。

更新日志文件：

This file contains any messages produced by compilers while running configure,to aID deBUGging if configure makes a mistake. It was created by rJava configure 0.8,which was generated by GNU autoconf 2.61. Invocation command line was $ ./configure ## --------- ## ## Platform. ## ## --------- ## hostname = linux-k2a8.site uname -m = i686 uname -r = 3.4.63-2.44-desktop uname -s = linux uname -v = #1 SMP PREEMPT Wed Oct 2 11:18:32 UTC 2013 (d91a619) /usr/bin/uname -p = i686 /bin/uname -X = unkNown /bin/arch = i686 /usr/bin/arch -k = unkNown /usr/convex/getsysinfo = unkNown /usr/bin/hostinfo = unkNown /bin/machine = unkNown /usr/bin/oslevel = unkNown /bin/universe = unkNown PATH: /home/uwe/bin PATH: /usr/local/bin PATH: /usr/bin PATH: /bin PATH: /usr/bin/X11 PATH: /usr/X11R6/bin PATH: /usr/games PATH: /opt/kde3/bin ## ----------- ## ## Core tests. ## ## ----------- ## configure:1616: loading site script /usr/share/site/i686-pc-linux-gnu | #!/bin/sh | # Site script for configure. It is resourced via $CONfig_SITE environment varaible. | | # If user dID not specify libdir,guess the correct target: | # Use lib64 for 64 bit bi-arch targets,keep the default for the rest. | if test "$libdir" = '${exec_prefix}/lib' ; then | | ac_config_site_64bit_host=NONE | | case "$host" in | "" ) | # User dID not specify host target. | # The native platform i386 is not a bi-arch platform. | # There is no need to check for compatible sub-architecture. | ac_config_site_64bit_host=NONE | | ;; | *x86_64* | *ppc64* | *s390x* ) | ac_config_site_64bit_host=YES | ;; | esac | | if test "x$ac_config_site_64bit_host" = xYES; then | libdir='${exec_prefix}/lib64' | fi | fi | | # If user dID not specify libexecdir,set the correct target: | # nor FHS nor openSUSE allow prefix/libexec. Let's default to prefix/lib. | | if test "$libexecdir" = '${exec_prefix}/libexec' ; then | libexecdir='${exec_prefix}/lib' | fi | | # Continue with the standard behavior of configure defined in AC_SITE_LOAD: | if test "x$prefix" != xNONE; then | ac_site_file1=$prefix/share/config.site | ac_site_file2=$prefix/etc/config.site | else | ac_site_file1=$ac_default_prefix/share/config.site | ac_site_file2=$ac_default_prefix/etc/config.site | fi | for ac_site_file in "$ac_site_file1" "$ac_site_file2" | do | test "x$ac_site_file" = xNONE && continue | if test /dev/null != "$ac_site_file" && test -r "$ac_site_file"; then | { $as_echo "/usr/share/site/i686-pc-linux-gnu:${as_lineno-$liNENO}: loading site script $ac_site_file" >&5 | $as_echo "/usr/share/site/i686-pc-linux-gnu: loading site script $ac_site_file" >&6;} | sed 's/^/| /' "$ac_site_file" >&5 | . "$ac_site_file" | || { { $as_echo "/usr/share/site/i686-pc-linux-gnu:${as_lineno-$liNENO}: error: in `$ac_pwd':" >&5 | $as_echo "/usr/share/site/i686-pc-linux-gnu: error: in `$ac_pwd':" >&2;} | as_fn_error $? "Failed to load site script $ac_site_file | See `config.log' for more details" "$liNENO" 5; } | fi | done configure:1847: checking for gcc configure:1874: result: gcc -std=gnu99 configure:2112: checking for C compiler version configure:2119: gcc -std=gnu99 --version >&5 gcc (SUSE linux) 4.7.1 20120723 [gcc-4_7-branch revision 189773] copyright (C) 2012 Free Software Foundation,Inc. This is free software; see the source for copying conditions. There is NO warranty; not even for MERCHANTABIliTY or fitness FOR A PARTIculaR PURPOSE. configure:2122: $? = 0 configure:2129: gcc -std=gnu99 -v >&5 Using built-in specs. ColLECT_GCC=gcc ColLECT_LTO_WRAPPER=/usr/lib/gcc/i586-suse-linux/4.7/lto-wrapper Target: i586-suse-linux Configured with: ../configure --prefix=/usr --infodir=/usr/share/info --mandir=/usr/share/man --libdir=/usr/lib --libexecdir=/usr/lib --enable-languages=c,c++,objc,fortran,obj-c++,java,ada --enable-checking=release --with-gxx-include-dir=/usr/include/c++/4.7 --enable-ssp --disable-libssp --disable-libitm --disable-plugin --with-BUGurl=http://BUGs.opensuse.org/ --with-pkgversion='SUSE linux' --disable-libgcj --disable-libmudflap --with-slibdir=/lib --with-system-zlib --enable-__cxa_atexit --enable-libstdcxx-allocator=new --disable-libstdcxx-pch --enable-version-specific-runtime-libs --enable-linker-build-ID --program-suffix=-4.7 --enable-linux-futex --without-system-@R_569_4035@ --with-arch-32=i586 --with-tune=generic --build=i586-suse-linux Thread model: posix gcc version 4.7.1 20120723 [gcc-4_7-branch revision 189773] (SUSE linux) configure:2132: $? = 0 configure:2139: gcc -std=gnu99 -V >&5 gcc: error: unrecognized command line option '-V' gcc: Fatal error: no input files compilation terminated. configure:2142: $? = 1 configure:2165: checking for C compiler default output file name configure:2192: gcc -std=gnu99 -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:2195: $? = 0 configure:2233: result: a.out configure:2250: checking whether the C compiler works configure:2260: ./a.out configure:2263: $? = 0 configure:2280: result: yes configure:2287: checking whether we are cross compiling configure:2289: result: no configure:2292: checking for suffix of executables configure:2299: gcc -std=gnu99 -o conftest -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:2302: $? = 0 configure:2326: result: configure:2332: checking for suffix of object files configure:2358: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:2361: $? = 0 configure:2384: result: o configure:2388: checking whether we are using the GNU C compiler configure:2417: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:2423: $? = 0 configure:2440: result: yes configure:2445: checking whether gcc -std=gnu99 accepts -g configure:2475: gcc -std=gnu99 -c -g conftest.c >&5 configure:2481: $? = 0 configure:2580: result: yes configure:2597: checking for gcc -std=gnu99 option to accept ISO C89 configure:2671: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:2677: $? = 0 configure:2700: result: none needed configure:2728: checking how to run the C preprocessor configure:2768: gcc -std=gnu99 -E conftest.c configure:2774: $? = 0 configure:2805: gcc -std=gnu99 -E conftest.c conftest.c:8:28: Fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:2811: $? = 1 configure: Failed program was: | /* confdefs.h. */ | #define PACKAGE_name "rJava" | #define PACKAGE_TARname "rjava" | #define PACKAGE_VERSION "0.8" | #define PACKAGE_STRING "rJava 0.8" | #define PACKAGE_BUGREPORT "[email protected]" | /* end confdefs.h. */ | #include <ac_nonexistent.h> configure:2844: result: gcc -std=gnu99 -E configure:2873: gcc -std=gnu99 -E conftest.c configure:2879: $? = 0 configure:2910: gcc -std=gnu99 -E conftest.c conftest.c:8:28: Fatal error: ac_nonexistent.h: No such file or directory compilation terminated. configure:2916: $? = 1 configure: Failed program was: | /* confdefs.h. */ | #define PACKAGE_name "rJava" | #define PACKAGE_TARname "rjava" | #define PACKAGE_VERSION "0.8" | #define PACKAGE_STRING "rJava 0.8" | #define PACKAGE_BUGREPORT "[email protected]" | /* end confdefs.h. */ | #include <ac_nonexistent.h> configure:2954: checking for grep that handles long lines and -e configure:3028: result: /usr/bin/grep configure:3033: checking for egrep configure:3111: result: /usr/bin/grep -E configure:3116: checking for ANSI C header files configure:3146: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3152: $? = 0 configure:3251: gcc -std=gnu99 -o conftest -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3254: $? = 0 configure:3260: ./conftest configure:3263: $? = 0 configure:3280: result: yes configure:3290: checking for sys/wait.h that is POSIX.1 compatible configure:3326: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3332: $? = 0 configure:3347: result: yes configure:3371: checking for sys/types.h configure:3392: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3398: $? = 0 configure:3414: result: yes configure:3371: checking for sys/stat.h configure:3392: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3398: $? = 0 configure:3414: result: yes configure:3371: checking for stdlib.h configure:3392: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3398: $? = 0 configure:3414: result: yes configure:3371: checking for string.h configure:3392: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3398: $? = 0 configure:3414: result: yes configure:3371: checking for memory.h configure:3392: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3398: $? = 0 configure:3414: result: yes configure:3371: checking for strings.h configure:3392: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3398: $? = 0 configure:3414: result: yes configure:3371: checking for inttypes.h configure:3392: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3398: $? = 0 configure:3414: result: yes configure:3371: checking for stdint.h configure:3392: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3398: $? = 0 configure:3414: result: yes configure:3371: checking for unistd.h configure:3392: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3398: $? = 0 configure:3414: result: yes configure:3433: checking for string.h configure:3439: result: yes configure:3443: checking sys/time.h usability configure:3460: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3466: $? = 0 configure:3480: result: yes configure:3484: checking sys/time.h presence configure:3499: gcc -std=gnu99 -E conftest.c configure:3505: $? = 0 configure:3519: result: yes configure:3552: checking for sys/time.h configure:3560: result: yes configure:3433: checking for unistd.h configure:3439: result: yes configure:3575: checking for an ANSI C-conforming const configure:3650: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 conftest.c: In function 'main': conftest.c:51:10: warning: 't' is used uninitialized in this function [-Wuninitialized] conftest.c:73:13: warning: 'cs[0]' is used uninitialized in this function [-Wuninitialized] configure:3656: $? = 0 configure:3671: result: yes configure:3681: checking whether time.h and sys/time.h may both be included configure:3711: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3717: $? = 0 configure:3732: result: yes configure:3743: checking whether gcc -std=gnu99 supports static inline... configure:3761: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 conftest.c:3:8: warning: type defaults to 'int' in declaration of 'f' [enabled by default] configure:3767: $? = 0 configure:3781: result: yes configure:3792: checking whether setjmp.h is POSIX.1 compatible configure:3820: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3826: $? = 0 configure:3841: result: yes configure:3843: checking whether sigsetjmp is declared configure:3873: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3879: $? = 0 configure:3894: result: yes configure:3910: checking whether siglongjmp is declared configure:3940: gcc -std=gnu99 -c -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables conftest.c >&5 configure:3946: $? = 0 configure:3961: result: yes configure:3993: checking Java support in R configure:4030: result: present: interpreter : '/usr/bin/java' archiver : '/usr/bin/jar' compiler : '/usr/bin/javac' header prep.: '/usr/bin/javah' cpp flags : '-I/usr/lib/jdk1.7.0_45/jre/../include -I/usr/lib/jdk1.7.0_45/jre/../include/linux' java libs : '-L/usr/lib/jdk1.7.0_45/jre/lib/i386/clIEnt -ljvm' configure:4090: checking whether JNI programs can be compiled configure:4108: gcc -std=gnu99 -o conftest -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables -I/usr/lib/jdk1.7.0_45/jre/../include -I/usr/lib/jdk1.7.0_45/jre/../include/linux conftest.c -L/usr/lib/jdk1.7.0_45/jre/lib/i386/clIEnt -ljvm >&5 conftest.c: In function 'main': conftest.c:4:13: warning: unused variable 'o' [-Wunused-variable] configure:4114: $? = 0 configure:4120: result: yes configure:4142: checking JNI data types configure:4167: gcc -std=gnu99 -o conftest -fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables -I/usr/lib/jdk1.7.0_45/jre/../include -I/usr/lib/jdk1.7.0_45/jre/../include/linux conftest.c -L/usr/lib/jdk1.7.0_45/jre/lib/i386/clIEnt -ljvm >&5 configure:4170: $? = 0 configure:4176: ./conftest ./conftest: error while loading shared librarIEs: libjvm.so: cannot open shared object file: No such file or directory configure:4179: $? = 127 configure: program exited with status 127 configure: Failed program was: | /* confdefs.h. */ | #define PACKAGE_name "rJava" | #define PACKAGE_TARname "rjava" | #define PACKAGE_VERSION "0.8" | #define PACKAGE_STRING "rJava 0.8" | #define PACKAGE_BUGREPORT "[email protected]" | #define STDC_headerS 1 | #define HAVE_SYS_WAIT_H 1 | #define HAVE_SYS_TYPES_H 1 | #define HAVE_SYS_STAT_H 1 | #define HAVE_STDliB_H 1 | #define HAVE_STRING_H 1 | #define HAVE_MEMORY_H 1 | #define HAVE_STRINGS_H 1 | #define HAVE_INTTYPES_H 1 | #define HAVE_STDINT_H 1 | #define HAVE_UNISTD_H 1 | #define HAVE_STRING_H 1 | #define HAVE_SYS_TIME_H 1 | #define HAVE_UNISTD_H 1 | #define TIME_WITH_SYS_TIME 1 | #define HAVE_STATIC_INliNE 1 | #define HAVE_DECL_SIGSETJMP 1 | #define HAVE_DECL_SIGLONGJMP 1 | #define HAVE_POSIX_SETJMP 1 | /* end confdefs.h. */ | | #include <jni.h> | int main(voID) { | return (sizeof(int)==sizeof(jint) && sizeof(long)==sizeof(long) && sizeof(jbyte)==sizeof(char) && sizeof(Jshort)==sizeof(short) && sizeof(jfloat)==sizeof(float) && sizeof(jdouble)==sizeof(double))?0:1; | } | configure:4189: error: One or more JNI types differ from the corresponding native type. You may need to use non-standard compiler flags or a different compiler in order to fix this. ## ---------------- ## ## Cache variables. ## ## ---------------- ## ac_cv_c_compiler_gnu=yes ac_cv_c_const=yes ac_cv_env_CC_set= ac_cv_env_CC_value= ac_cv_env_CFLAGS_set= ac_cv_env_CFLAGS_value= ac_cv_env_CPPFLAGS_set= ac_cv_env_CPPFLAGS_value= ac_cv_env_CPP_set= ac_cv_env_CPP_value= ac_cv_env_LDFLAGS_set= ac_cv_env_LDFLAGS_value= ac_cv_env_liBS_set= ac_cv_env_liBS_value= ac_cv_env_build_alias_set= ac_cv_env_build_alias_value= ac_cv_env_host_alias_set= ac_cv_env_host_alias_value= ac_cv_env_target_alias_set= ac_cv_env_target_alias_value= ac_cv_have_decl_siglongjmp=yes ac_cv_have_decl_sigsetjmp=yes ac_cv_header_inttypes_h=yes ac_cv_header_memory_h=yes ac_cv_header_stdc=yes ac_cv_header_stdint_h=yes ac_cv_header_stdlib_h=yes ac_cv_header_string_h=yes ac_cv_header_strings_h=yes ac_cv_header_sys_stat_h=yes ac_cv_header_sys_time_h=yes ac_cv_header_sys_types_h=yes ac_cv_header_sys_wait_h=yes ac_cv_header_time=yes ac_cv_header_unistd_h=yes ac_cv_objext=o ac_cv_path_EGREP='/usr/bin/grep -E' ac_cv_path_GREP=/usr/bin/grep ac_cv_prog_CPP='gcc -std=gnu99 -E' ac_cv_prog_ac_ct_CC='gcc -std=gnu99' ac_cv_prog_cc_c89= ac_cv_prog_cc_g=yes r_cv_header_setjmp_posix=yes ## ----------------- ## ## Output variables. ## ## ----------------- ## CC='gcc -std=gnu99' CFLAGS='-fomit-frame-pointer -fmessage-length=0 -O2 -Wall -D_FORTIFY_SOURCE=2 -fstack-protector -funwind-tables -fasynchronous-unwind-tables -I/usr/lib/jdk1.7.0_45/jre/../include -I/usr/lib/jdk1.7.0_45/jre/../include/linux' CPP='gcc -std=gnu99 -E' CPPFLAGS='' DEFS='' ECHO_C='' ECHO_N='-n' ECHO_T='' EGREP='/usr/bin/grep -E' EXEEXT='' GREP='/usr/bin/grep' JAVA='/usr/bin/java' JAVAC='/usr/bin/javac' JAVAH='/usr/bin/javah' JAVA_CPPFLAGS='-I/usr/lib/jdk1.7.0_45/jre/../include -I/usr/lib/jdk1.7.0_45/jre/../include/linux' JAVA_HOME='/usr/java/default' JAVA_liBS='-L/usr/lib/jdk1.7.0_45/jre/lib/i386/clIEnt -ljvm' LDFLAGS='' liBOBJs='' liBS=' -L/usr/lib/jdk1.7.0_45/jre/lib/i386/clIEnt -ljvm' LTliBOBJs='' OBJEXT='o' PACKAGE_BUGREPORT='[email protected]' PACKAGE_name='rJava' PACKAGE_STRING='rJava 0.8' PACKAGE_TARname='rjava' PACKAGE_VERSION='0.8' PATH_SEParaTOR=':' R_HOME='/usr/lib/R' SHELL='/bin/sh' WANT_jri_FALSE='' WANT_jri_TRUE='' ac_ct_CC='gcc -std=gnu99' bindir='${exec_prefix}/bin' build_alias='' datadir='${daTarootdir}' daTarootdir='${prefix}/share' docdir='${daTarootdir}/doc/${PACKAGE_TARname}' dvIDir='${docdir}' exec_prefix='NONE' host_alias='' HTMLdir='${docdir}' includedir='${prefix}/include' infodir='${daTarootdir}/info' libdir='${exec_prefix}/lib' libexecdir='${exec_prefix}/lib' localedir='${daTarootdir}/locale' localstatedir='${prefix}/var' mandir='${daTarootdir}/man' oldincludedir='/usr/include' pdfdir='${docdir}' prefix='NONE' program_transform_name='s,x,' psdir='${docdir}' sbindir='${exec_prefix}/sbin' sharedstatedir='${prefix}/com' subdirs='' sysconfdir='${prefix}/etc' target_alias='' ## ----------- ## ## confdefs.h. ## ## ----------- ## #define PACKAGE_name "rJava" #define PACKAGE_TARname "rjava" #define PACKAGE_VERSION "0.8" #define PACKAGE_STRING "rJava 0.8" #define PACKAGE_BUGREPORT "[email protected]" #define STDC_headerS 1 #define HAVE_SYS_WAIT_H 1 #define HAVE_SYS_TYPES_H 1 #define HAVE_SYS_STAT_H 1 #define HAVE_STDliB_H 1 #define HAVE_STRING_H 1 #define HAVE_MEMORY_H 1 #define HAVE_STRINGS_H 1 #define HAVE_INTTYPES_H 1 #define HAVE_STDINT_H 1 #define HAVE_UNISTD_H 1 #define HAVE_STRING_H 1 #define HAVE_SYS_TIME_H 1 #define HAVE_UNISTD_H 1 #define TIME_WITH_SYS_TIME 1 #define HAVE_STATIC_INliNE 1 #define HAVE_DECL_SIGSETJMP 1 #define HAVE_DECL_SIGLONGJMP 1 #define HAVE_POSIX_SETJMP 1 configure: exit 1

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总结

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